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WOB
2004
120views Bioinformatics» more  WOB 2004»
14 years 11 months ago
Reconfigurable Systems for Sequence Alignment and for General Dynamic Programming
ABSTRACT. Reconfigurable systolic arrays can be adapted to efficiently resolve a wide spectrum of computational problems; parallelism is naturally explored in systolic arrays and r...
Ricardo P. Jacobi, Mauricio Ayala-Rincón, L...
OOPSLA
2010
Springer
14 years 7 months ago
Encapsulation and locality: a foundation for concurrency support in multi-language virtual machines?
We propose to search for common abstractions for different concurrency models to enable high-level language virtual machines to support a wide range of different concurrency model...
Stefan Marr
BMCBI
2004
150views more  BMCBI 2004»
14 years 9 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
PPDP
2010
Springer
14 years 7 months ago
Precise complexity analysis for efficient datalog queries
Given a set of Datalog rules, facts, and a query, answers to the query can be inferred bottom-up starting with the facts or top-down starting with the query. For efficiently answe...
K. Tuncay Tekle, Yanhong A. Liu
ICFP
2002
ACM
15 years 10 months ago
Packrat parsing: : simple, powerful, lazy, linear time, functional pearl
Packrat parsing is a novel technique for implementing parsers in a lazy functional programming language. A packrat parser provides the power and flexibility of top-down parsing wi...
Bryan Ford