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BMCBI
2007
168views more  BMCBI 2007»
14 years 10 months ago
Benchmarking consensus model quality assessment for protein fold recognition
Background: Selecting the highest quality 3D model of a protein structure from a number of alternatives remains an important challenge in the field of structural bioinformatics. M...
Liam J. McGuffin
ECOOP
2005
Springer
15 years 3 months ago
Open Modules: Modular Reasoning About Advice
Advice is a mechanism used by advanced object-oriented and aspect-oriented programming languages to augment the behavior of methods in a program. Advice can help to make programs m...
Jonathan Aldrich
POPL
2012
ACM
13 years 5 months ago
A type system for borrowing permissions
In object-oriented programming, unique permissions to object references are useful for checking correctness properties such as consistency of typestate and noninterference of conc...
Karl Naden, Robert Bocchino, Jonathan Aldrich, Kev...
BMCBI
2010
131views more  BMCBI 2010»
14 years 10 months ago
FACT: Functional annotation transfer between proteins with similar feature architectures
Background: The increasing number of sequenced genomes provides the basis for exploring the genetic and functional diversity within the tree of life. Only a tiny fraction of the e...
Tina Koestler, Arndt von Haeseler, Ingo Ebersberge...
IDEAL
2005
Springer
15 years 3 months ago
Patterns in Complex Systems Modeling
The design, development, and use of complex systems models raises a unique class of challenges and potential pitfalls, many of which are commonly recurring problems. Over time, res...
Janet Wiles, James Watson