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BMCBI
2010
121views more  BMCBI 2010»
14 years 9 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
COLT
1997
Springer
15 years 4 months ago
On-line Learning and the Metrical Task System Problem
We relate two problems that have been explored in two distinct communities. The first is the problem of combining expert advice, studied extensively in the computational learning...
Avrim Blum, Carl Burch
FUIN
2006
98views more  FUIN 2006»
14 years 11 months ago
On-line Approximate String Matching in Natural Language
We consider approximate pattern matching in natural language text. We use the words of the text as the alphabet, instead of the characters as in traditional string matching approac...
Kimmo Fredriksson
RECOMB
2007
Springer
16 years 3 days ago
Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
Rohit Singh, Jinbo Xu, Bonnie Berger
ATAL
2005
Springer
15 years 5 months ago
Experiences with the design and implementation of an agent-based autonomous UAV controller
This paper reports experiences and outcomes of designing and developing an agent–based, autonomous mission control system for an unmanned aerial vehicle (UAV). Most UAVs are not...
Samin Karim, Clinton Heinze