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» A complex biological database querying method
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BMCBI
2010
122views more  BMCBI 2010»
15 years 2 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
ICDE
2009
IEEE
159views Database» more  ICDE 2009»
16 years 3 months ago
Sketch-Based Summarization of Ordered XML Streams
XML streams, such as RSS feeds or complex event streams, are becoming increasingly pervasive as they provide the foundation for a wide range of emerging applications. An important...
Veronica Mayorga, Neoklis Polyzotis
DMS
2010
189views Multimedia» more  DMS 2010»
14 years 12 months ago
Visualizing the Commonalities Between Hierarchically Structured Data Queries
Abstract--In this paper we present an information visualization approach for visualizing the intersection between multiple feature hierarchies. In cases where a dataset has multipl...
Chad Jones, Ryan Armstrong, Kwan-Liu Ma
IPPS
2002
IEEE
15 years 6 months ago
Improving Performance of Multiple Sequence Alignment Analysis in Multi-Client Environments
This paper is concerned with the efficient execution of multiplesequence alignmentmethodsin a multipleclientenvironment. Multiple sequence alignment (MSA) is a computationally ex...
Ümit V. Çatalyürek, Eric Stahlber...
ICDE
1999
IEEE
89views Database» more  ICDE 1999»
16 years 3 months ago
Relative Prefix Sums: An Efficient Approach for Querying Dynamic OLAP Data Cubes
Range sum queries on data cubes are a powerful tool for analysis. A range sum query applies an aggregation operation (e.g., SUM) over all selected cells in a data cube, where the ...
Steven Geffner, Divyakant Agrawal, Amr El Abbadi, ...