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» A copula method for modeling directional dependence of genes
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SADM
2011
14 years 4 months ago
Trellis display for modeling data from designed experiments
Abstract: Visualizing data by graphing a response against certain factors, and conditioning on other factors, has arisen independently in many contexts. One is the interaction plot...
Montserrat Fuentes, Bowei Xi, William S. Cleveland
SIAMREV
2010
132views more  SIAMREV 2010»
14 years 4 months ago
A Stochastic Collocation Method for Elliptic Partial Differential Equations with Random Input Data
In this paper we propose and analyze a Stochastic-Collocation method to solve elliptic Partial Differential Equations with random coefficients and forcing terms (input data of the...
Ivo Babuska, Fabio Nobile, Raúl Tempone
PVM
2010
Springer
14 years 8 months ago
Toward Performance Models of MPI Implementations for Understanding Application Scaling Issues
Abstract. Designing and tuning parallel applications with MPI, particularly at large scale, requires understanding the performance implications of different choices of algorithms ...
Torsten Hoefler, William Gropp, Rajeev Thakur, Jes...
BMCBI
2005
169views more  BMCBI 2005»
14 years 9 months ago
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes
Background: Cis-regulatory modules are combinations of regulatory elements occurring in close proximity to each other that control the spatial and temporal expression of genes. Th...
Voichita D. Marinescu, Isaac S. Kohane, Alberto Ri...
BMCBI
2004
132views more  BMCBI 2004»
14 years 9 months ago
Two-stage normalization using background intensities in cDNA microarray data
Background: In the microarray experiment, many undesirable systematic variations are commonly observed. Normalization is the process of removing such variation that affects the me...
Dankyu Yoon, Sung-Gon Yi, Ju-Han Kim, Taesung Park