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» A factor model to analyze heterogeneity in gene expression
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138
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NAR
2011
267views Computer Vision» more  NAR 2011»
14 years 4 months ago
EcoCyc: a comprehensive database of Escherichia coli biology
EcoCyc (http://EcoCyc.org) is a comprehensive model organism database for Escherichia coli K-12 MG1655. From the scientific literature, EcoCyc captures the functions of individual...
Ingrid M. Keseler, Julio Collado-Vides, Alberto Sa...
83
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PPOPP
2010
ACM
15 years 6 months ago
Scalable communication protocols for dynamic sparse data exchange
Many large-scale parallel programs follow a bulk synchronous parallel (BSP) structure with distinct computation and communication phases. Although the communication phase in such ...
Torsten Hoefler, Christian Siebert, Andrew Lumsdai...
BMCBI
2007
147views more  BMCBI 2007»
14 years 9 months ago
Statistical significance of quantitative PCR
Background: PCR has the potential to detect and precisely quantify specific DNA sequences, but it is not yet often used as a fully quantitative method. A number of data collection...
Yann Karlen, Alan McNair, Sébastien Persegu...
BMCBI
2007
127views more  BMCBI 2007»
14 years 9 months ago
Characterization and simulation of cDNA microarray spots using a novel mathematical model
Background: The quality of cDNA microarray data is crucial for expanding its application to other research areas, such as the study of gene regulatory networks. Despite the fact t...
Hye Young Kim, Seo Eun Lee, Min Jung Kim, Jin Il H...
BMCBI
2008
118views more  BMCBI 2008»
14 years 9 months ago
Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
Background: The detection of conserved motifs in promoters of orthologous genes (phylogenetic footprints) has become a common strategy to predict cis-acting regulatory elements. S...
Rekin's Janky, Jacques van Helden