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» A genome alignment algorithm based on compression
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IPPS
2005
IEEE
15 years 3 months ago
RC-BLAST: Towards a Portable, Cost-Effective Open Source Hardware Implementation
Basic Local Alignment Search Tool (BLAST) is a standard computer application that molecular biologists use to search for sequence similarity in genomic databases. This report desc...
Krishna Muriki, Keith D. Underwood, Ron Sass
BMCBI
2010
193views more  BMCBI 2010»
14 years 9 months ago
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
Background: Mass spectrometry (MS) coupled with online separation methods is commonly applied for differential and quantitative profiling of biological samples in metabolomic as w...
Tomás Pluskal, Sandra Castillo, Alejandro V...
EUROSSC
2007
Springer
15 years 3 months ago
The Design of a Pressure Sensing Floor for Movement-Based Human Computer Interaction
This paper addresses the design of a large area, high resolution, networked pressure sensing floor with primary application in movement-based human-computer interaction (M-HCI). T...
Sankar Rangarajan, Assegid Kidané, Gang Qia...
ICASSP
2009
IEEE
15 years 4 months ago
DNA coding using finite-context models and arithmetic coding
The interest in DNA coding has been growing with the availability of extensive genomic databases. Although only two bits are sufficient to encode the four DNA bases, efficient l...
Armando J. Pinho, António J. R. Neves, Carl...
SODA
2003
ACM
142views Algorithms» more  SODA 2003»
14 years 10 months ago
The similarity metric
—A new class of distances appropriate for measuring similarity relations between sequences, say one type of similarity per distance, is studied. We propose a new “normalized in...
Ming Li, Xin Chen, Xin Li, Bin Ma, Paul M. B. Vit&...