82 search results - page 5 / 17 » A genome alignment algorithm based on compression |
IMSCCS
2006
IEEE
15 years 3 months ago
2006
IEEE
Comparative genomics has become an essential approach for identifying homologous gene candidates and their functions, and for studying genome evolution. We developed GenomeBlast, ...
CSB
2005
IEEE
15 years 3 months ago
2005
IEEE
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
BMCBI
2008
14 years 9 months ago
2008
Background: At intermediate stages of genome assembly projects, when a number of contigs have been generated and their validity needs to be verified, it is desirable to align thes...
BMCBI
2006
14 years 9 months ago
2006
Background: Phylogenetic methods which do not rely on multiple sequence alignments are important tools in inferring trees directly from completely sequenced genomes. Here, we exte...
CSB
2003
IEEE
15 years 2 months ago
2003
IEEE
A simple statistical block code in combination with the LZW-based compression utilities gzip and compress has been found to increase by a significant amount the level of compressi...