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» A geometric database for gene expression data
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BMCBI
2006
147views more  BMCBI 2006»
13 years 6 months ago
QPath: a method for querying pathways in a protein-protein interaction network
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sh...
HIPC
2009
Springer
13 years 4 months ago
Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations
Abstract--Microarray-based comparative genomic hybridization (aCGH) offers an increasingly fine-grained method for detecting copy number variations in DNA. These copy number variat...
Jeffrey A. Delmerico, Nathanial A. Byrnes, Andrew ...
PRICAI
2004
Springer
13 years 11 months ago
Computational Methods for Identification of Human microRNA Precursors
MicroRNA (miRNA), one of non-coding RNAs (ncRNAs), regulates gene expression directly by arresting the messenger RNA (mRNA) translation, which is important for identifying putative...
Jin-Wu Nam, Wha-Jin Lee, Byoung-Tak Zhang
BMCBI
2006
114views more  BMCBI 2006»
13 years 6 months ago
PROMPT: a protein mapping and comparison tool
Background: Comparison of large protein datasets has become a standard task in bioinformatics. Typically researchers wish to know whether one group of proteins is significantly en...
Thorsten Schmidt, Dmitrij Frishman
ER
2004
Springer
161views Database» more  ER 2004»
13 years 11 months ago
Towards a Statistically Semantic Web
The envisioned Semantic Web aims to provide richly annotated and explicitly structured Web pages in XML, RDF, or description logics, based upon underlying ontologies and thesauri. ...
Gerhard Weikum, Jens Graupmann, Ralf Schenkel, Mar...