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» A graphical model for predicting protein molecular function
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ISMB
1996
15 years 29 days ago
A Knowledge-Based Method for Protein Structure Refinement and Prediction
The native conformation of a protein, in a given environment, is determined entirely by the various interatomic interactions dictated by the amino acid sequence (1-3). We describe...
Shankar Subramaniam, David K. Tcheng, James M. Fen...
TCSB
2010
14 years 10 months ago
Modelling Self-assembly in BlenX
Abstract. The process through which disordered components spontaneously arrange themselves into patterns is called self-assembly. Molecular self-assembly describes the process by w...
Roberto Larcher, Corrado Priami, Alessandro Romane...
BMCBI
2004
265views more  BMCBI 2004»
14 years 11 months ago
ASAView: Database and tool for solvent accessibility representation in proteins
Background: Accessible surface area (ASA) or solvent accessibility of amino acids in a protein has important implications. Knowledge of surface residues helps in locating potentia...
Shandar Ahmad, M. Michael Gromiha, Hamed Fawareh, ...
CIBCB
2005
IEEE
15 years 5 months ago
Predicting Peroxisomal Proteins
— PTS1 proteins are peroxisomal matrix proteins that have a well conserved targeting motif at the C-terminal end. However, this motif is present in many non peroxisomal proteins ...
John Hawkins, Mikael Bodén
CEC
2011
IEEE
13 years 11 months ago
Comparing alternative energy functions for the HP model of protein structure prediction
Abstract—Protein structure prediction is the problem of finding the functional conformation of a protein given only its amino uence. The HP lattice model is an abstract formulat...
Mario Garza-Fabre, Eduardo Rodriguez-Tello, Gregor...