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» A guide to membrane computing
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TCBB
2010
77views more  TCBB 2010»
14 years 8 months ago
Multidimensional Profiling of Cell Surface Proteins and Nuclear Markers
Cell membrane proteins play an important role in tissue architecture and cell-cell communication. We hypothesize that segmentation and multidimensional characterization of the dist...
Ju Han, Hang Chang, Kumari L. Andarawewa, Paul Yas...
BMCBI
2007
63views more  BMCBI 2007»
15 years 1 months ago
Prediction of the burial status of transmembrane residues of helical membrane proteins
Background: Helical membrane proteins (HMPs) play a crucial role in diverse cellular processes, yet it still remains extremely difficult to determine their structures by experimen...
Yungki Park, Sikander Hayat, Volkhard Helms
128
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BMCBI
2005
114views more  BMCBI 2005»
15 years 1 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio
BMCBI
2011
14 years 9 months ago
Outer membrane proteins can be simply identified using secondary structure element alignment
Background: Outer membrane proteins (OMPs) are frequently found in the outer membranes of gram-negative bacteria, mitochondria and chloroplasts and have been found to play diverse...
Ren-Xiang Yan, Zhen Chen, Ziding Zhang