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    JPDC
    2007
    167views more  JPDC 2007»
    On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
    13 years 6 months ago
    On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
    Download  www.cc.gatech.edu
    In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
    Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
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    RECOMB
    2009
    Springer
    153views Computational Biology» more  RECOMB 2009»
    Finding Biologically Accurate Clusterings in Hierarchical Tree Decompositions Using the Variation of Information
    14 years 6 months ago
    Finding Biologically Accurate Clusterings in Hierarchical Tree Decompositions Using the Variation of Information
    Download  www.cbcb.umd.edu
    Abstract. Hierarchical clustering is a popular method for grouping together similar elements based on a distance measure between them. In many cases, annotation information for som...
    Saket Navlakha, James Robert White, Niranjan Nagar...
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    ISCAPDCS
    2007
    175views Distributed And Parallel Com...» more  ISCAPDCS 2007»
    Architectural requirements of parallel computational biology applications with explicit instruction level parallelism
    13 years 7 months ago
    Architectural requirements of parallel computational biology applications with explicit instruction level parallelism
    Download  publik.tuwien.ac.at
    —The tremendous growth in the information culture, efficient digital searches are needed to extract and identify information from huge data. The notion that evolution in silicon ...
    Naeem Zafar Azeemi
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    BIBE
    2005
    IEEE
    154views Bioinformatics» more  BIBE 2005»
    Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
    13 years 12 months ago
    Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network
    Download  www.cse.ohio-state.edu
    In this article we present novel preprocessing techniques, based on topological measures of the network, to identify clusters of proteins from Protein-protein interaction (PPI) ne...
    Duygu Ucar, Srinivasan Parthasarathy, Sitaram Asur...
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    AIIA
    2009
    Springer
    153views Artificial Intelligence» more  AIIA 2009»
    Ontology-Driven Co-clustering of Gene Expression Data
    14 years 26 days ago
    Ontology-Driven Co-clustering of Gene Expression Data
    Download  compbio.di.unito.it
    Abstract. The huge volume of gene expression data produced by microarrays and other high-throughput techniques has encouraged the development of new computational techniques to eva...
    Francesca Cordero, Ruggero G. Pensa, Alessia Visco...
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