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BMCBI
2007
135views more  BMCBI 2007»
13 years 6 months ago
Automatic extraction of reliable regions from multiple sequence alignments
Background: High quality multiple alignments are crucial in the transfer of annotation from one genome to another. Multiple alignment methods strive to achieve ever increasing lev...
Timo Lassmann, Erik L. L. Sonnhammer
FAC
2008
100views more  FAC 2008»
13 years 6 months ago
Slicing communicating automata specifications: polynomial algorithms for model reduction
Abstract. Slicing is a program analysis technique that was originally introduced to improve program debugging and understanding. The purpose of a slicing algorithm is to remove the...
Sébastien Labbé, Jean-Pierre Gallois
DAC
1998
ACM
14 years 7 months ago
A Mixed Nodal-Mesh Formulation for Efficient Extraction and Passive Reduced-Order Modeling of 3D Interconnects
As VLSI circuit speeds have increased, reliable chip and system design can no longer be performed without accurate threedimensional interconnect models. In this paper, we describe...
Nuno Alexandre Marques, Mattan Kamon, Jacob White,...
BMCBI
2006
144views more  BMCBI 2006»
13 years 6 months ago
More robust detection of motifs in coexpressed genes by using phylogenetic information
Background: Several motif detection algorithms have been developed to discover overrepresented motifs in sets of coexpressed genes. However, in a noisy gene list, the number of ge...
Pieter Monsieurs, Gert Thijs, Abeer A. Fadda, Sigr...
ASPDAC
1999
ACM
144views Hardware» more  ASPDAC 1999»
13 years 10 months ago
Model Order Reduction of Large Circuits Using Balanced Truncation
A method is introduced for model order reduction of large circuits extracted from layout. The algorithm, which is based on balanced realization, can be used for reducing the order ...
Payam Rabiei, Massoud Pedram