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» A new approach to analyzing gene expression time series data
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SIGMOD
2004
ACM
188views Database» more  SIGMOD 2004»
15 years 10 months ago
Online Event-driven Subsequence Matching over Financial Data Streams
Subsequence similarity matching in time series databases is an important research area for many applications. This paper presents a new approximate approach for automatic online s...
Huanmei Wu, Betty Salzberg, Donghui Zhang
BMCBI
2007
114views more  BMCBI 2007»
14 years 9 months ago
Mining and state-space modeling and verification of sub-networks from large-scale biomolecular networks
Background: Biomolecular networks dynamically respond to stimuli and implement cellular function. Understanding these dynamic changes is the key challenge for cell biologists. As ...
Xiaohua Hu, Fang-Xiang Wu
BMCBI
2007
172views more  BMCBI 2007»
14 years 9 months ago
Bayesian approaches to reverse engineer cellular systems: a simulation study on nonlinear Gaussian networks
Background: Reverse engineering cellular networks is currently one of the most challenging problems in systems biology. Dynamic Bayesian networks (DBNs) seem to be particularly su...
Fulvia Ferrazzi, Paola Sebastiani, Marco Ramoni, R...
IMSCCS
2006
IEEE
15 years 3 months ago
Frequency Distribution of TATA Box and Extension Sequences on Human Promoters
Background: TATA box is one of the most important transcription factor binding sites. But the exact sequences of TATA box are still not very clear. Results: In this study, we cond...
Wei Shi, Wanlei Zhou
BMCBI
2010
139views more  BMCBI 2010»
14 years 9 months ago
A highly efficient multi-core algorithm for clustering extremely large datasets
Background: In recent years, the demand for computational power in computational biology has increased due to rapidly growing data sets from microarray and other high-throughput t...
Johann M. Kraus, Hans A. Kestler