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IPPS
2000
IEEE
15 years 2 months ago
Optoelectronic Multi-chip Modules Based on Imaging Fiber Bundle Structures
In this paper, we present a new packaging architecture for chip-level optical interconnections based on imaging fiber bundles. Imaging fiber bundles consist of densely packed arra...
Donald M. Chiarulli, Steven P. Levitan
BMCBI
2006
117views more  BMCBI 2006»
14 years 9 months ago
Incorporating background frequency improves entropy-based residue conservation measures
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Kai Wang, Ram Samudrala
IJCBDD
2008
141views more  IJCBDD 2008»
14 years 9 months ago
CLUSS2: an alignment-independent algorithm for clustering protein families with multiple biological functions
: CLUSS is an algorithm proposed for clustering both alignable and non-alignable protein sequences. However, CLUSS tends to be ineffective on protein datasets that include a large ...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski
ICML
2004
IEEE
15 years 10 months ago
Support vector machine learning for interdependent and structured output spaces
Learning general functional dependencies is one of the main goals in machine learning. Recent progress in kernel-based methods has focused on designing flexible and powerful input...
Ioannis Tsochantaridis, Thomas Hofmann, Thorsten J...
SSDBM
2007
IEEE
131views Database» more  SSDBM 2007»
15 years 4 months ago
Mining RNA Tertiary Motifs with Structure Graphs
We present a novel application of graph database mining to identify tertiary motifs in RNA structures. In od, we abstract an RNA molecule as a labeled graph and use a frequent sub...
Xueyi Wang, Jun Huan, Jack Snoeyink, Wei Wang 0010