A new form of optimality for comparison based static dictionaries is introduced. This type of optimality, keyindependent optimality, is motivated by applications that assign key v...
Background: Members of a protein family often have highly conserved sequences; most of these sequences carry identical biological functions and possess similar three-dimensional (...
Background: Detecting homology between remotely related protein families is an important problem in computational biology since the biological properties of uncharacterized protei...
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
MicroSIMD architectures incorporating subword parallelism are very efficient for application-specific media processors as well as for fast multimedia information processing in gen...