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BIBE
2008
IEEE
142views Bioinformatics» more  BIBE 2008»
15 years 9 months ago
Optimizing performance, cost, and sensitivity in pairwise sequence search on a cluster of PlayStations
— The Smith-Waterman algorithm is a dynamic programming method for determining optimal local alignments between nucleotide or protein sequences. However, it suffers from quadrati...
Ashwin M. Aji, Wu-chun Feng
154
Voted
ICANNGA
2007
Springer
191views Algorithms» more  ICANNGA 2007»
15 years 8 months ago
Novel Multi-layer Non-negative Tensor Factorization with Sparsity Constraints
In this paper we present a new method of 3D non-negative tensor factorization (NTF) that is robust in the presence of noise and has many potential applications, including multi-way...
Andrzej Cichocki, Rafal Zdunek, Seungjin Choi, Rob...
KDD
2007
ACM
179views Data Mining» more  KDD 2007»
15 years 8 months ago
Mining statistically important equivalence classes and delta-discriminative emerging patterns
The support-confidence framework is the most common measure used in itemset mining algorithms, for its antimonotonicity that effectively simplifies the search lattice. This com...
Jinyan Li, Guimei Liu, Limsoon Wong
RTCSA
2006
IEEE
15 years 8 months ago
Instruction Scheduling with Release Times and Deadlines on ILP Processors
ILP (Instruction Level Parallelism) processors are being increasingly used in embedded systems. In embedded systems, instructions may be subject to timing constraints. An optimisi...
Hui Wu, Joxan Jaffar, Jingling Xue
COCO
2005
Springer
123views Algorithms» more  COCO 2005»
15 years 8 months ago
If NP Languages are Hard on the Worst-Case Then It is Easy to Find Their Hard Instances
We prove that if NP ⊆ BPP, i.e., if SAT is worst-case hard, then for every probabilistic polynomial-time algorithm trying to decide SAT, there exists some polynomially samplable ...
Dan Gutfreund, Ronen Shaltiel, Amnon Ta-Shma