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JCB
2006
114views more  JCB 2006»
15 years 4 months ago
A General Modeling Strategy for Gene Regulatory Networks with Stochastic Dynamics
A stochastic genetic toggle switch model that consists of two identical, mutually repressive genes is built using the Gillespie algorithm with time delays as an example of a simpl...
Andre Ribeiro, Rui Zhu, Stuart A. Kauffman
GECCO
2003
Springer
415views Optimization» more  GECCO 2003»
15 years 10 months ago
Evolutionary Algorithms for Two Problems from the Calculus of Variations
Abstract. A brachistochrone is the path along which a weighted particle falls most quickly from one point to another, and a catenary is the smooth curve connecting two points whose...
Bryant A. Julstrom
RECOMB
2006
Springer
16 years 5 months ago
Algorithms to Distinguish the Role of Gene-Conversion from Single-Crossover Recombination in the Derivation of SNP Sequences in
Meiotic recombination is a fundamental biological event and one of the principal evolutionary forces responsible for shaping genetic variation within species. In addition to its fu...
Yun S. Song, Zhihong Ding, Dan Gusfield, Charles H...
ISBRA
2007
Springer
15 years 10 months ago
GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters
Clustering has been one of the most popular approaches used in gene expression data analysis. A clustering method is typically used to partition genes according to their similarity...
Xubo Fei, Shiyong Lu, Horia F. Pop, Lily R. Liang
BMCBI
2007
186views more  BMCBI 2007»
15 years 4 months ago
Modeling human cancer-related regulatory modules by GA-RNN hybrid algorithms
Background: Modeling cancer-related regulatory modules from gene expression profiling of cancer tissues is expected to contribute to our understanding of cancer biology as well as...
Jung-Hsien Chiang, Shih-Yi Chao