154 search results - page 16 / 31 » A polyhedral approach to sequence alignment problems |
COMPLIFE
2005
Springer
15 years 3 months ago
2005
Springer
During the last few years new functionalities of RNA have been discovered, renewing the need for computational tools for their analysis. To this respect, multiple sequence alignmen...
BMCBI
2005
14 years 9 months ago
2005
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
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GCB
2000
Springer
15 years 1 months ago
2000
Springer
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
100
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BIOCOMP
2007
14 years 11 months ago
2007
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
BMCBI
2006
14 years 9 months ago
2006
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...