154 search results - page 6 / 31 » A polyhedral approach to sequence alignment problems |
115
click to vote
BMCBI
2010
14 years 7 months ago
2010
Background: Traditional genome alignment methods consider sequence alignment as a variation of the string edit distance problem, and perform alignment by matching characters of th...
BMCBI
2008
14 years 9 months ago
2008
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
EMNLP
2007
14 years 11 months ago
2007
We describe a discriminatively trained sequence alignment model based on the averaged perceptron. In common with other approaches to sequence modeling using perceptrons, and in co...
ICANNGA
2007
Springer
15 years 3 months ago
2007
Springer
A new evolutionary-progressive method for Multiple Sequence Alignment problem is proposed. The method efficiently combines flexibility of evolutionary approach with speed and accu...
BMCBI
2010
14 years 9 months ago
2010
Background: Sequence alignments form part of many investigations in molecular biology, including the determination of phylogenetic relationships, the prediction of protein structu...