154 search results - page 7 / 31 » A polyhedral approach to sequence alignment problems |
ALMOB
2008
14 years 9 months ago
2008
Background: Protein structure alignments are usually based on very different techniques to sequence alignments. We propose a method which treats sequence, structure and even combi...
LSSC
2007
Springer
15 years 3 months ago
2007
Springer
Abstract. Multiple sequence alignment is a key process in today’s biology, and finding a relevant alignment of several sequences is much more challenging than just optimizing so...
CONSTRAINTS
2008
14 years 9 months ago
2008
Aligning DNA and protein sequences is a core technique in molecular biology. Often, it is desirable to include partial prior knowledge and conditions in an alignment. Going beyond...
BIBE
2006
IEEE
15 years 3 months ago
2006
IEEE
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
CSB
2003
IEEE
15 years 2 months ago
2003
IEEE
The problem addressed by this paper is accurate and automatic gene annotation following precise identification/annotation of exon and intron boundaries of biologically verified ...