154 search results - page 8 / 31 » A polyhedral approach to sequence alignment problems |
DOCENG
2006
ACM
15 years 3 months ago
2006
ACM
With the advent of XML we have seen a renewed interest in methods for computing the difference between trees. Methods that include heuristic elements play an important role in pr...
BMCBI
2006
14 years 9 months ago
2006
Background: A structure alignment method based on a local geometric property is presented and its performance is tested in pairwise and multiple structure alignments. In this appr...
ICDM
2008
IEEE
15 years 4 months ago
2008
IEEE
The task of aligning sequences arises in many applications. Classical dynamic programming approaches require the explicit state enumeration in the reward model. This is often impr...
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BMCBI
2005
14 years 9 months ago
2005
Background: Currently available methods to predict splice sites are mainly based on the independent and progressive alignment of transcript data (mostly ESTs) to the genomic seque...
JPDC
2006
14 years 9 months ago
2006
Multiple sequence alignment (MSA) and phylogenetic tree reconstruction are one of the most important problems in the computational biology. While both these problems are of great ...