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» A practical comparison of two K-Means clustering algorithms
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WABI
2004
Springer
15 years 5 months ago
Novel Tree Edit Operations for RNA Secondary Structure Comparison
We describe an algorithm for comparing two RNA secondary structures coded in the form of trees that introduces two novel operations, called node fusion and edge fusion, besides the...
Julien Allali, Marie-France Sagot
CORR
2008
Springer
120views Education» more  CORR 2008»
14 years 11 months ago
A new distance for high level RNA secondary structure comparison
We describe an algorithm for comparing two RNA secondary structures coded in the form of trees that introduces two new operations, called node fusion and edge fusion, besides the t...
Julien Allali, Marie-France Sagot
BMCBI
2008
142views more  BMCBI 2008»
14 years 11 months ago
Genetic weighted k-means algorithm for clustering large-scale gene expression data
Background: The traditional (unweighted) k-means is one of the most popular clustering methods for analyzing gene expression data. However, it suffers three major shortcomings. It...
Fang-Xiang Wu
BMCBI
2008
116views more  BMCBI 2008»
14 years 11 months ago
Clustering exact matches of pairwise sequence alignments by weighted linear regression
Background: At intermediate stages of genome assembly projects, when a number of contigs have been generated and their validity needs to be verified, it is desirable to align thes...
Alvaro J. González, Li Liao
PKDD
2010
Springer
166views Data Mining» more  PKDD 2010»
14 years 10 months ago
A Cluster-Level Semi-supervision Model for Interactive Clustering
Abstract. Semi-supervised clustering models, that incorporate user provided constraints to yield meaningful clusters, have recently become a popular area of research. In this paper...
Avinava Dubey, Indrajit Bhattacharya, Shantanu God...