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    BMCBI
    2008
    111views more  BMCBI 2008»
    Probabilistic base calling of Solexa sequencing data
    13 years 6 months ago
    Probabilistic base calling of Solexa sequencing data
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    Background: Solexa/Illumina short-read ultra-high throughput DNA sequencing technology produces millions of short tags (up to 36 bases) by parallel sequencing-by-synthesis of DNA ...
    Jacques Rougemont, Arnaud Amzallag, Christian Isel...
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    CORR
    2008
    Springer
    118views Education» more  CORR 2008»
    The price of certainty: "waterslide curves" and the gap to capacity
    13 years 6 months ago
    The price of certainty: "waterslide curves" and the gap to capacity
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    The classical problem of reliable point-to-point digital communication is to achieve a low probability of error while keeping the rate high and the total power consumption small. ...
    Anant Sahai, Pulkit Grover
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    BMCBI
    2006
    103views more  BMCBI 2006»
    Probe-level linear model fitting and mixture modeling results in high accuracy detection of differential gene expression
    13 years 6 months ago
    Probe-level linear model fitting and mixture modeling results in high accuracy detection of differential gene expression
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    Background: The identification of differentially expressed genes (DEGs) from Affymetrix GeneChips arrays is currently done by first computing expression levels from the low-level ...
    Sébastien Lemieux
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    BMCBI
    2007
    187views more  BMCBI 2007»
    BioWMS: a web-based Workflow Management System for bioinformatics
    13 years 6 months ago
    BioWMS: a web-based Workflow Management System for bioinformatics
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    Background: An in-silico experiment can be naturally specified as a workflow of activities implementing, in a standardized environment, the process of data and control analysis. A...
    Ezio Bartocci, Flavio Corradini, Emanuela Merelli,...
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    BMCBI
    2005
    94views more  BMCBI 2005»
    Measuring similarities between transcription factor binding sites
    13 years 6 months ago
    Measuring similarities between transcription factor binding sites
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    Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...
    Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
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