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BMCBI
2005
145views more  BMCBI 2005»
14 years 9 months ago
CAGER: classification analysis of gene expression regulation using multiple information sources
Background: Many classification approaches have been applied to analyzing transcriptional regulation of gene expressions. These methods build models that can explain a gene's...
Jianhua Ruan, Weixiong Zhang
BMCBI
2005
152views more  BMCBI 2005»
14 years 9 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
BMCBI
2004
166views more  BMCBI 2004»
14 years 9 months ago
Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models
Background: Many current gene prediction methods use only one model to represent proteincoding regions in a genome, and so are less likely to predict the location of genes that ha...
Shaun Mahony, James O. McInerney, Terry J. Smith, ...
SCP
1998
112views more  SCP 1998»
14 years 9 months ago
Structured Gamma
The Gamma language is based on the chemical reaction metaphor which has a number of benefits with respect to parallelism and program derivation. But the original definition of G...
Pascal Fradet, Daniel Le Métayer
DAC
2007
ACM
15 years 10 months ago
Implicitly Parallel Programming Models for Thousand-Core Microprocessors
This paper argues for an implicitly parallel programming model for many-core microprocessors, and provides initial technical approaches towards this goal. In an implicitly paralle...
Wen-mei W. Hwu, Shane Ryoo, Sain-Zee Ueng, John H....