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» A robust model for finding optimal evolutionary trees
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BMCBI
2005
137views more  BMCBI 2005»
14 years 9 months ago
A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
Olivier Bastien, Philippe Ortet, Sylvaine Roy, Eri...
82
Voted
RECOMB
2006
Springer
15 years 10 months ago
Efficient Enumeration of Phylogenetically Informative Substrings
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sa...
BMCBI
2004
126views more  BMCBI 2004»
14 years 9 months ago
A probabilistic model for the evolution of RNA structure
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
Ian Holmes
VLDB
1994
ACM
153views Database» more  VLDB 1994»
15 years 1 months ago
Optimization Algorithms for Exploiting the Parallelism-Communication Tradeoff in Pipelined Parallelism
We address the problem of finding parallel plans for SQL queries using the two-phase approach of join ordering followed by parallelization. We focus on the parallelization phase a...
Waqar Hasan, Rajeev Motwani
104
Voted
HUMO
2007
Springer
15 years 1 months ago
Efficient Upper Body Pose Estimation from a Single Image or a Sequence
We propose a method to find candidate 2D articulated model configurations by searching for locally optimal configurations under a weak but computationally manageable fitness functi...
Matheen Siddiqui, Gérard G. Medioni