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AAIM
2009
Springer
137views Algorithms» more  AAIM 2009»
15 years 10 months ago
On Approximating an Implicit Cover Problem in Biology
Abstract. In an implicit combinatorial optimization problem, the constraints are not enumerated explicitly but rather stated implicitly through equations, other constraints or auxi...
Mary V. Ashley, Tanya Y. Berger-Wolf, Wanpracha Ar...
CPM
2005
Springer
116views Combinatorics» more  CPM 2005»
15 years 8 months ago
Exact and Approximation Algorithms for DNA Tag Set Design
In this paper we propose new solution methods for designing tag sets for use in universal DNA arrays. First, we give integer linear programming formulations for two previous formal...
Ion I. Mandoiu, Dragos Trinca
COCOA
2008
Springer
15 years 5 months ago
Multiple Hypernode Hitting Sets and Smallest Two-Cores with Targets
The multiple weighted hitting set problem is to find a subset of nodes in a hypergraph that hits every hyperedge in at least m nodes. We extend the problem to a notion of hypergra...
Peter Damaschke
115
Voted
STOC
1990
ACM
108views Algorithms» more  STOC 1990»
15 years 7 months ago
Optimal Randomized Algorithms for Local Sorting and Set-Maxima
We present randomized algorithms for two sorting problems. In the local sorting problem, a graph is given in which each vertex is assigned an element of a total order, and the task...
Wayne Goddard, Valerie King, Leonard J. Schulman
MST
2006
129views more  MST 2006»
15 years 3 months ago
Reachability Problems on Regular Ground Tree Rewriting Graphs
We consider the transition graphs of regular ground tree (or term) rewriting systems. The vertex set of such a graph is a (possibly infinite) set of trees. Thus, with a finite tree...
Christof Löding