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CSB
2005
IEEE
130views Bioinformatics» more  CSB 2005»
15 years 3 months ago
iSimBioSys: An "In Silico" Discrete Event Simulation Framework for Modeling Biological Systems
The genome projects have provided comprehensive information about the basic building blocks of life. The next challenge is to understand how biological functions emerge from compl...
Samik Ghosh, Preetam Ghosh, Kalyan Basu, Sajal K. ...
MASCOTS
2007
14 years 11 months ago
Network Performance Analysis based on Histogram Workload Models
Network performance analysis relies mainly on two models: a workload model and a performance model. This paper proposes to use histograms for characterising the arrival workloads ...
Enrique Hernández-Orallo, Joan Vila-Carb&oa...
SEFM
2006
IEEE
15 years 3 months ago
Describing and Executing Random Reactive Systems
We present an operational model for describing random reactive systems. Some models have already been proposed for this purpose, but they generally aim at performing global reason...
Pascal Raymond, Erwan Jahier, Yvan Roux
WOSP
2004
ACM
15 years 3 months ago
Software performance modelling using PEPA nets
Modelling and analysing distributed and mobile software systems is a challenging task. PEPA nets—coloured stochastic Petri nets—are a recently introduced modelling formalism w...
Stephen Gilmore, Jane Hillston, Leïla Kloul, ...
BMCBI
2010
259views more  BMCBI 2010»
14 years 4 months ago
Rule-based spatial modeling with diffusing, geometrically constrained molecules
Background: We suggest a new type of modeling approach for the coarse grained, particle-based spatial simulation of combinatorially complex chemical reaction systems. In our appro...
Gerd Gruenert, Bashar Ibrahim, Thorsten Lenser, Ma...