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BMCBI
2004
323views more  BMCBI 2004»
14 years 9 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
FMCO
2009
Springer
161views Formal Methods» more  FMCO 2009»
14 years 7 months ago
The How and Why of Interactive Markov Chains
This paper reviews the model of interactive Markov chains (IMCs, for short), an extension of labelled transition systems with exponentially delayed transitions. We show that IMCs a...
Holger Hermanns, Joost-Pieter Katoen
100
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CMSB
2011
Springer
13 years 9 months ago
The singular power of the environment on stochastic nonlinear threshold Boolean automata networks
Abstract. This paper tackles theoretically the question of the structural stability of biological regulation networks subjected to the influence of their environment. The model of...
Jacques Demongeot, Sylvain Sené
SAGA
2009
Springer
15 years 4 months ago
Scenario Reduction Techniques in Stochastic Programming
Stochastic programming problems appear as mathematical models for optimization problems under stochastic uncertainty. Most computational approaches for solving such models are base...
Werner Römisch
ICALP
2009
Springer
15 years 10 months ago
Rate-Based Transition Systems for Stochastic Process Calculi
A variant of Rate Transition Systems (RTS), proposed by Klin and Sassone, is introduced and used as the basic model for defining stochastic behaviour of processes. The transition r...
Rocco De Nicola, Diego Latella, Michele Loreti, Mi...