Sciweavers

61 search results - page 5 / 13
» A stochastic particle-based biological system simulator
Sort
View
JCB
2002
131views more  JCB 2002»
14 years 9 months ago
Modeling and Simulation of Genetic Regulatory Systems: A Literature Review
In order to understand the functioning of organisms on the molecular level, we need to know which genes are expressed, when and where in the organism, and to which extent. The reg...
Hidde de Jong
BMCBI
2004
323views more  BMCBI 2004»
14 years 9 months ago
Biochemical Network Stochastic Simulator (BioNetS): software for stochastic modeling of biochemical networks
Background: Intrinsic fluctuations due to the stochastic nature of biochemical reactions can have large effects on the response of biochemical networks. This is particularly true ...
David Adalsteinsson, David McMillen, Timothy C. El...
83
Voted
FPGA
2004
ACM
174views FPGA» more  FPGA 2004»
15 years 2 months ago
A compiled accelerator for biological cell signaling simulations
The simulation of large systems of biochemical reactions is a key part of research into molecular signaling and information processing in biological cells. However, it can be impr...
John F. Keane, Christopher Bradley, Carl Ebeling
BIOADIT
2004
Springer
15 years 2 months ago
Dynamic Self-Assembly and Computation: From Biological to Information Systems
We present two ways in which dynamic self-assembly can be used to perform computation, via stochastic protein networks and self-assembling software. We describe our protein-emulati...
Ann M. Bouchard, Gordon C. Osbourn
ICASSP
2011
IEEE
14 years 1 months ago
A stochastic compartmental approach to modeling and simulation of cancer spheroid formation and evolution
In this paper we model and simulate a biological system describing the evolution of cancer stem cells into tumors. Starting from some basic hypotheses about the behavior of these ...
Mónica F. Bugallo, Shishir Dash, Galina Bot...