296 search results - page 11 / 60 » A structural alignment kernel for protein structures |
GCB
2004
Springer
15 years 3 months ago
2004
Springer
: We introduce the novel concept of graph alignment, a generalization of graph isomorphism that is motivated by the commonly used multiple sequence alignments. Graph alignments and...
DASFAA
2005
IEEE
15 years 3 months ago
2005
IEEE
A novel approach for similarity search on the protein structure databases is proposed. PADS (Protein Alignment by Directional shape Signatures) incorporates the three dimensional ...
BMCBI
2007
14 years 9 months ago
2007
Background: For successful protein structure prediction by comparative modeling, in addition to identifying a good template protein with known structure, obtaining an accurate seq...
103
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NAR
2007
14 years 9 months ago
2007
The DBAli tools use a comprehensive set of structural alignments in the DBAli database to leverage the structural information deposited in the Protein Data Bank (PDB). These tools...
105
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NAR
2007
14 years 9 months ago
2007
Multiple sequence alignments are essential in homology inference, structure modeling, functional prediction and phylogenetic analysis. We developed a web server that constructs mu...