296 search results - page 20 / 60 » A structural alignment kernel for protein structures |
BMCBI
2007
14 years 9 months ago
2007
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
GCB
2005
Springer
15 years 3 months ago
2005
Springer
Motivation: With the increasing availability of protein structures, the generation of biologically meaningful 3D patterns from the simultaneous alignment of several protein struct...
93
Voted
CIKM
2009
Springer
15 years 4 months ago
2009
Springer
Background: Although both conservation and correlated mutation (CM) are important information reflecting the different sorts of context in multiple sequence alignment, most of ali...
ICML
2004
IEEE
15 years 10 months ago
2004
IEEE
In this paper, we present a graphical model for protein secondary structure prediction. This model extends segmental semi-Markov models (SSMM) to exploit multiple sequence alignme...
88
Voted
NAR
2006
14 years 9 months ago
2006
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...