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» A structural alignment kernel for protein structures
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BIBE
2005
IEEE
15 years 3 months ago
Improved Phylogenetic Motif Detection Using Parsimony
We have recently demonstrated (La et al, Proteins, 58:2005) that sequence fragments approximating the overall familial phylogeny, called phylogenetic motifs (PMs), represent a pro...
Usman Roshan, Dennis R. Livesay, David La
BMCBI
2010
160views more  BMCBI 2010»
14 years 4 months ago
eHive: An Artificial Intelligence workflow system for genomic analysis
Background: The Ensembl project produces updates to its comparative genomics resources with each of its several releases per year. During each release cycle approximately two week...
Jessica Severin, Kathryn Beal, Albert J. Vilella, ...
TSP
2008
134views more  TSP 2008»
14 years 9 months ago
A Mapping-Based Design for Nonsubsampled Hourglass Filter Banks in Arbitrary Dimensions
Multidimensional hourglass filter banks decompose the frequency spectrum of input signals into hourglass-shaped directional subbands, each aligned with one of the frequency axes. T...
Yue M. Lu, Minh N. Do
BMCBI
2007
114views more  BMCBI 2007»
14 years 9 months ago
Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome
Background: The structure annotation of a genome is based either on ab initio methodologies or on similaritiy searches versus molecules that have been already annotated. Ab initio...
Nunzio D'Agostino, Alessandra Traini, Luigi Frusci...
NIPS
1998
14 years 11 months ago
Coding Time-Varying Signals Using Sparse, Shift-Invariant Representations
A common way to represent a time series is to divide it into shortduration blocks, each of which is then represented by a set of basis functions. A limitation of this approach, ho...
Michael S. Lewicki, Terrence J. Sejnowski