296 search results - page 7 / 60 » A structural alignment kernel for protein structures |
BMCBI
2005
14 years 9 months ago
2005
Background: We introduce GASH, a new, publicly accessible program for structural alignment and superposition. Alignments are scored by the Number of Equivalent Residues (NER), a q...
102
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NAR
1998
14 years 9 months ago
1998
The FSSP database and its new supplement, the Dali Domain Dictionary, present a continuously updated classification of all known 3D protein structures. The classification is deriv...
93
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BMCBI
2011
14 years 4 months ago
2011
Background: Outer membrane proteins (OMPs) are frequently found in the outer membranes of gram-negative bacteria, mitochondria and chloroplasts and have been found to play diverse...
CSB
2003
IEEE
15 years 2 months ago
2003
IEEE
We propose two methods for finding similarities in protein structure databases. Our techniques extract feature vectors on triplets of SSEs (Secondary Structure Elements) of prote...
BMCBI
2008
2008
Fr-TM-align: a new protein structural alignment method based on fragment alignments and the TM-score
14 years 9 months ago