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BMCBI
2007
148views more  BMCBI 2007»
14 years 12 months ago
fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Background: The precision of transcriptional regulation is made possible by the specificity of physical interactions between transcription factors and their cognate binding sites ...
Randy Z. Wu, Christina Chaivorapol, Jiashun Zheng,...
JIB
2006
220views more  JIB 2006»
14 years 11 months ago
An assessment of machine and statistical learning approaches to inferring networks of protein-protein interactions
Protein-protein interactions (PPI) play a key role in many biological systems. Over the past few years, an explosion in availability of functional biological data obtained from hi...
Fiona Browne, Haiying Wang, Huiru Zheng, Francisco...
JCC
2007
79views more  JCC 2007»
14 years 11 months ago
Interfacing Q-Chem and CHARMM to perform QM/MM reaction path calculations
Abstract: A hybrid quantum mechanical/molecular mechanical (QM/MM) potential energy function with HartreeFock, density functional theory (DFT), and post-HF (RIMP2, MP2, CCSD) capab...
H. Lee Woodcock III, Milan Hodoscek, Andrew T. B. ...
INFORMS
1998
150views more  INFORMS 1998»
14 years 11 months ago
Branch and Infer: A Unifying Framework for Integer and Finite Domain Constraint Programming
constraint abstractions into integer programming, and to discuss possible combinations of the two approaches. Combinatorial problems are ubiquitous in many real world applications ...
Alexander Bockmayr, Thomas Kasper
SAC
2008
ACM
14 years 11 months ago
A hybrid software-based self-testing methodology for embedded processor
Software-based self-test (SBST) is emerging as a promising technology for enabling at-speed testing of high-speed embedded processors testing in an SoC system. For SBST, test rout...
Tai-Hua Lu, Chung-Ho Chen, Kuen-Jong Lee