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» A topological characterization of weakness
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BMCBI
2010
143views more  BMCBI 2010»
14 years 9 months ago
Learning gene regulatory networks from only positive and unlabeled data
Background: Recently, supervised learning methods have been exploited to reconstruct gene regulatory networks from gene expression data. The reconstruction of a network is modeled...
Luigi Cerulo, Charles Elkan, Michele Ceccarelli
BMCBI
2008
153views more  BMCBI 2008»
14 years 9 months ago
Estimating the size of the solution space of metabolic networks
Background: Cellular metabolism is one of the most investigated system of biological interactions. While the topological nature of individual reactions and pathways in the network...
Alfredo Braunstein, Roberto Mulet, Andrea Pagnani
BMCBI
2007
157views more  BMCBI 2007»
14 years 9 months ago
Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory
Background: Large-scale sequencing of entire genomes has ushered in a new age in biology. One of the next grand challenges is to dissect the cellular networks consisting of many i...
Feng Luo, Yunfeng Yang, Jianxin Zhong, Haichun Gao...
CGF
2010
146views more  CGF 2010»
14 years 9 months ago
Pathline: A Tool For Comparative Functional Genomics
Biologists pioneering the new field of comparative functional genomics attempt to infer the mechanisms of gene regulation by looking for similarities and differences of gene activ...
Miriah D. Meyer, Bang Wong, Mark P. Styczynski, Ta...
CN
2008
140views more  CN 2008»
14 years 9 months ago
Congestion control in utility fair networks
This paper deals with a congestion control framework for elastic and real-time traffic, where the user's application is associated with a utility function. We allow users to ...
Tobias Harks, Tobias Poschwatta