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GECCO
2007
Springer
154views Optimization» more  GECCO 2007»
15 years 4 months ago
A novel ab-initio genetic-based approach for protein folding prediction
In this paper, a model based on genetic algorithms for protein folding prediction is proposed. The most important features of the proposed approach are: i) Heuristic secondary str...
Sergio Raul Duarte Torres, David Camilo Becerra Ro...
SIGDIAL
2010
14 years 8 months ago
Using entity features to classify implicit discourse relations
We report results on predicting the sense of implicit discourse relations between adjacent sentences in text. Our investigation concentrates on the association between discourse r...
Annie Louis, Aravind K. Joshi, Rashmi Prasad, Ani ...
JCC
2011
154views more  JCC 2011»
14 years 1 months ago
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...
97
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BMCBI
2006
105views more  BMCBI 2006»
14 years 10 months ago
CRNPRED: highly accurate prediction of one-dimensional protein structures by large-scale critical random networks
Background: One-dimensional protein structures such as secondary structures or contact numbers are useful for three-dimensional structure prediction and helpful for intuitive unde...
Akira R. Kinjo, Ken Nishikawa
BMCBI
2006
172views more  BMCBI 2006»
14 years 10 months ago
Prediction of cis/trans isomerization in proteins using PSI-BLAST profiles and secondary structure information
Background: The majority of peptide bonds in proteins are found to occur in the trans conformation. However, for proline residues, a considerable fraction of Prolyl peptide bonds ...
Jiangning Song, Kevin Burrage, Zheng Yuan, Thomas ...