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BMCBI
2006
130views more  BMCBI 2006»
14 years 10 months ago
Docking protein domains in contact space
Background: Many biological processes involve the physical interaction between protein domains. Understanding these functional associations requires knowledge of the molecular str...
Stefano Lise, Alice Walker-Taylor, David T. Jones
BMCBI
2007
216views more  BMCBI 2007»
14 years 10 months ago
A replica exchange Monte Carlo algorithm for protein folding in the HP model
Background: The ab initio protein folding problem consists of predicting protein tertiary structure from a given amino acid sequence by minimizing an energy function; it is one of...
Chris Thachuk, Alena Shmygelska, Holger H. Hoos
ADAEUROPE
2004
Springer
15 years 3 months ago
The Chance for Ada to Support Distribution and Real-Time in Embedded Systems
This paper presents a modification of GLADE —the current GNAT implementation of the Ada 95 Distributed Systems Annex (DSA)— to support the development of distributed applicatio...
Juan López Campos, J. Javier Gutiérr...
109
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CAISE
2010
Springer
14 years 11 months ago
Beyond Process Mining: From the Past to Present and Future
Abstract. Traditionally, process mining has been used to extract models from event logs and to check or extend existing models. This has shown to be useful for improving processes ...
Wil M. P. van der Aalst, Maja Pesic, Minseok Song
BMCBI
2005
116views more  BMCBI 2005»
14 years 10 months ago
SuperLigands - a database of ligand structures derived from the Protein Data Bank
Background: Currently, the PDB contains approximately 29,000 protein structures comprising over 70,000 experimentally determined three-dimensional structures of over 5,000 differe...
Elke Michalsky, Mathias Dunkel, Andrean Goede, Rob...