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BMCBI
2008
184views more  BMCBI 2008»
14 years 9 months ago
"TOF2H": A precision toolbox for rapid, high density/high coverage hydrogen-deuterium exchange mass spectrometry via an LC-MALDI
Background: Protein-amide proton hydrogen-deuterium exchange (HDX) is used to investigate protein conformation, conformational changes and surface binding sites for other molecule...
Pornpat Nikamanon, Elroy Pun, Wayne Chou, Marek D....
KDD
2002
ACM
154views Data Mining» more  KDD 2002»
15 years 10 months ago
Mining Protein Contact Maps
The 3D conformation of a protein may be compactly represented in a symmetrical, square, boolean matrix of pairwise, inter-residue contacts, or "contact map". The contact...
Jingjing Hu, Xiaolan Shen, Yu Shao, Chris Bystroff...
ICASSP
2009
IEEE
15 years 4 months ago
Exploiting statically schedulable regions in dataflow programs
Dataflow descriptions have been used in a wide range of Digital Signal Processing (DSP) applications, such as multi-media processing, and wireless communications. Among various f...
Ruirui Gu, Jörn W. Janneck, Mickaël Raul...
ECAL
2007
Springer
15 years 4 months ago
Folding Protein-Like Structures with Open L-Systems
Abstract. Proteins, under native conditions, fold to specific 3D structures according to their 1D amino acid sequence, which in turn is defined by the genetic code. The specific...
Gemma B. Danks, Susan Stepney, Leo S. D. Caves
CEC
2005
IEEE
15 years 3 months ago
A genetic algorithm for energy minimization in bio-molecular systems
Energy minimization algorithms for bio-molecular systems are critical to applications such as the prediction of protein folding. Conventional energy minimization methods such as th...
Xiaochun Weng, Lutz Hamel, Lenore M. Martin, Joan ...