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» A universe of binding and computation
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JVM
2001
105views Education» more  JVM 2001»
14 years 11 months ago
A Java Compiler for Many Memory Models
ompiler for Many Memory Models { extended abstract Samuel P. Midki IBM TJ Watson Research Jaejin Lee Dept. of Computer Science and Engineering, Michigan State University David A. P...
Samuel P. Midkiff
BMCBI
2007
97views more  BMCBI 2007»
14 years 10 months ago
Relating destabilizing regions to known functional sites in proteins
Background: Most methods for predicting functional sites in protein 3D structures, rely on information on related proteins and cannot be applied to proteins with no known relative...
Benoit H. Dessailly, Marc F. Lensink, Shoshana J. ...
BMCBI
2007
148views more  BMCBI 2007»
14 years 10 months ago
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
Background: This work addresses the problem of detecting conserved transcription factor binding sites and in general regulatory regions through the analysis of sequences from homo...
Giulio Pavesi, Federico Zambelli, Graziano Pesole
JCB
2008
159views more  JCB 2008»
14 years 10 months ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther
JFP
2008
72views more  JFP 2008»
14 years 10 months ago
Dynamic rebinding for marshalling and update, via redex-time and destruct-time reduction
Most programming languages adopt static binding, but for distributed programming an exclusive reliance on static binding is too restrictive: dynamic binding is required in various...
Peter Sewell, Gareth Stoyle, Michael Hicks, Gavin ...