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» A universe of binding and computation
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DSN
2011
IEEE
13 years 9 months ago
Transparent dynamic binding with fault-tolerant cache coherence protocol for chip multiprocessors
—Aggressive technology scaling causes chip multiprocessors increasingly error-prone. Core-level faulttolerant approaches bind two cores to implement redundant execution and error...
Shuchang Shan, Yu Hu, Xiaowei Li
BMCBI
2006
75views more  BMCBI 2006»
14 years 9 months ago
A machine learning strategy to identify candidate binding sites in human protein-coding sequence
Background: The splicing of RNA transcripts is thought to be partly promoted and regulated by sequences embedded within exons. Known sequences include binding sites for SR protein...
Thomas Down, Bernard Leong, Tim J. P. Hubbard
PPOPP
2010
ACM
15 years 4 months ago
Thread to strand binding of parallel network applications in massive multi-threaded systems
In processors with several levels of hardware resource sharing, like CMPs in which each core is an SMT, the scheduling process becomes more complex than in processors with a singl...
Petar Radojkovic, Vladimir Cakarevic, Javier Verd&...
90
Voted
BMCBI
2010
108views more  BMCBI 2010»
14 years 9 months ago
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
Fernando Garcia-Alcalde, Armando Blanco, Adrian J....
BMCBI
2005
104views more  BMCBI 2005»
14 years 9 months ago
Scoring functions for transcription factor binding site prediction
Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...