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» AS Relationships: Inference and Validation
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106
Voted
RECOMB
2007
Springer
16 years 1 months ago
A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements
Abstract. An important problem in biology is to understand correspondences between mRNA microarray levels and mass spectrometry peptide counts. Recently, a compendium of mRNA expre...
Anitha Kannan, Andrew Emili, Brendan J. Frey
BMCBI
2010
143views more  BMCBI 2010»
15 years 27 days ago
Learning gene regulatory networks from only positive and unlabeled data
Background: Recently, supervised learning methods have been exploited to reconstruct gene regulatory networks from gene expression data. The reconstruction of a network is modeled...
Luigi Cerulo, Charles Elkan, Michele Ceccarelli
105
Voted
BMCBI
2008
153views more  BMCBI 2008»
15 years 27 days ago
AWclust: point-and-click software for non-parametric population structure analysis
Background: Population structure analysis is important to genetic association studies and evolutionary investigations. Parametric approaches, e.g. STRUCTURE and L-POP, usually ass...
Xiaoyi Gao, Joshua D. Starmer
100
Voted
CN
2007
91views more  CN 2007»
15 years 24 days ago
Improving the quality of alerts and predicting intruder's next goal with Hidden Colored Petri-Net
Intrusion detection systems (IDS) often provide poor quality alerts, which are insufficient to support rapid identification of ongoing attacks or predict an intruder’s next lik...
Dong Yu, Deborah A. Frincke
107
Voted
AI
2004
Springer
15 years 20 days ago
Order-sorted logic programming with predicate hierarchy
Order-sorted logic has been formalized as first-order logic with sorted terms where sorts are ordered to build a hierarchy (called a sort-hierarchy). These sorted logics lead to u...
Ken Kaneiwa