Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
An ontology is a formal representation of a domain modeling the entities in the domain and their relations. When a domain is represented by multiple ontologies, there is need for ...
—The present study considers a fuzzy color system in which three membership functions are constructed on the RGB color triangle. This system can process a fuzzy input (as the mem...
We present a sound and complete calculus for causal relevance that uses Pearl's functional causal models as semantics. The calculus consists of axioms and rules of inference ...