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» ASP: from Application Development to Syntax Extensions
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CSB
2005
IEEE
128views Bioinformatics» more  CSB 2005»
15 years 5 months ago
Application of a Generalized MWC Model for the Mathematical Simulation of Metabolic Pathways Regulated by Allosteric Enzymes
In our effort to elucidate the systems biology of the model organism, Escherichia coli, we have developed a mathematical model that simulates the allosteric regulation for threoni...
Tarek S. Najdi, Chin-Rang Yang, Bruce E. Shapiro, ...
BMCBI
2010
125views more  BMCBI 2010»
15 years 4 months ago
Visualisation tool for peptide fractionation data in proteomics: application to OFFGEL isoelectric focussing
Background: OFFGEL isoelectric focussing (IEF) has become a popular tool in proteomics to fractionate peptides or proteins. As a consequence there is a need for software solutions...
David-Olivier D. Azulay, Hendrik Neubert, Mireia F...
BMCBI
2007
93views more  BMCBI 2007»
15 years 4 months ago
Representing default knowledge in biomedical ontologies: application to the integration of anatomy and phenotype ontologies
Background: Current efforts within the biomedical ontology community focus on achieving interoperability between various biomedical ontologies that cover a range of diverse domain...
Robert Hoehndorf, Frank Loebe, Janet Kelso, Heinri...
119
Voted
WSC
2007
15 years 6 months ago
Conceptual modeling of information exchange requirements based on ontological means
Unambiguous definition of the information exchanged between distributed systems is a necessary requirement for simulation system interoperability. The ontological spectrum categor...
Andreas Tolk, Charles D. Turnitsa
173
Voted
TII
2008
98views more  TII 2008»
15 years 3 months ago
Formal Methods for Systems Engineering Behavior Models
Abstract--Safety analysis in Systems Engineering (SE) processes, as usually implemented, rarely relies on formal methods such as model checking since such techniques, however power...
Charlotte Seidner, Olivier H. Roux