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BMCBI
2010
98views more  BMCBI 2010»
15 years 4 months ago
An optimized TOPS+ comparison method for enhanced TOPS models
nd: Although methods based on highly abstract descriptions of protein structures, such as VAST and TOPS, can perform very fast protein structure comparison, the results can lack a...
Mallika Veeramalai, David Gilbert, Gabriel Valient...
BMCBI
2008
124views more  BMCBI 2008»
15 years 4 months ago
Literature-aided meta-analysis of microarray data: a compendium study on muscle development and disease
Background: Comparative analysis of expression microarray studies is difficult due to the large influence of technical factors on experimental outcome. Still, the identified diffe...
Rob Jelier, Peter A. C. 't Hoen, Ellen Sterrenburg...
CORR
2010
Springer
156views Education» more  CORR 2010»
15 years 4 months ago
On the bias of BFS
Abstract--Breadth First Search (BFS) and other graph traversal techniques are widely used for measuring large unknown graphs, such as online social networks. It has been empiricall...
Maciej Kurant, Athina Markopoulou, Patrick Thiran
ENTCS
2008
106views more  ENTCS 2008»
15 years 4 months ago
Modelling Adaptive Systems in ForSyDe
Emerging architectures such as partially reconfigurable FPGAs provide a huge potential for adaptivity in the area of embedded systems. Since many system functions are only execute...
Ingo Sander, Axel Jantsch
BMCBI
2006
114views more  BMCBI 2006»
15 years 4 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
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