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ICCS
2009
Springer
14 years 11 months ago
A Population-Based Approach for Diversified Protein Loop Structure Sampling
Protein loop structure modeling is regarded as a mini protein folding problem with significant scientific importance. Efficiently sampling the loop conformation space is a key step...
Yaohang Li
RECOMB
2006
Springer
16 years 1 months ago
Assessing Significance of Connectivity and Conservation in Protein Interaction Networks
Computational and comparative analysis of protein-protein interaction (PPI) networks enable understanding of the modular organization of the cell through identification of functio...
Mehmet Koyutürk, Ananth Grama, Wojciech Szpan...
DATESO
2010
169views Database» more  DATESO 2010»
14 years 11 months ago
Parametrised Hausdorff Distance as a Non-Metric Similarity Model for Tandem Mass Spectrometry
Abstract. Tandem mass spectrometry is a widely used method for protein and peptide sequences identification. Since the mass spectra contain up to 80% of noise and many other inaccu...
Jiri Novák, David Hoksza
CP
2001
Springer
15 years 6 months ago
A CLP Approach to the Protein Side-Chain Placement Problem
Abstract. Selecting conformations for side-chains is an important subtask in building three-dimensional protein models. Side-chain placement is a difficult problem because of the l...
Martin T. Swain, Graham J. L. Kemp
BMCBI
2006
118views more  BMCBI 2006»
15 years 1 months ago
Predicting the effect of missense mutations on protein function: analysis with Bayesian networks
Background: A number of methods that use both protein structural and evolutionary information are available to predict the functional consequences of missense mutations. However, ...
Chris J. Needham, James R. Bradford, Andrew J. Bul...