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INFORMATICALT
2010
70views more  INFORMATICALT 2010»
14 years 10 months ago
Treatment of Over-Saturated Protein Spots in Two-Dimensional Electrophoresis Gel Images
The paper addresses the over-saturated protein spot detection and extraction problem in two-dimensional electrophoresis gel images. The effective technique for detection and recons...
Arturas Serackis, Dalius Navakauskas
AINA
2009
IEEE
15 years 6 months ago
The Small-World Model for Amino Acid Interaction Networks
—In this paper we introduce the notion of protein interaction network. This is a graph whose vertices are the protein’s amino acids and whose edges are the interactions between...
Omar Gaci, Stefan Balev
BMCBI
2005
94views more  BMCBI 2005»
14 years 11 months ago
Computational identification of strain-, species- and genus-specific proteins
Background: The identification of unique proteins at different taxonomic levels has both scientific and practical value. Strain-, species- and genus-specific proteins can provide ...
Raja Mazumder, Darren A. Natale, Sudhir Murthy, Ra...
IJBRA
2008
97views more  IJBRA 2008»
14 years 11 months ago
Extracting Protein-Protein Interactions from MEDLINE using the Hidden Vector State model
: A major challenge in text mining for biomedicine is automatically extracting protein-protein interactions from the vast amount of biomedical literature. We have constructed an in...
Deyu Zhou, Yulan He, Chee Keong Kwoh
BMCBI
2005
107views more  BMCBI 2005»
14 years 11 months ago
Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multip
Background: Predicting the subcellular localization of proteins is important for determining the function of proteins. Previous works focused on predicting protein localization in...
Jiren Wang, Wing-Kin Sung, Arun Krishnan, Kuo-Bin ...