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BMCBI
2006
122views more  BMCBI 2006»
15 years 1 months ago
A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks
Background:Receptors and scaffold proteins possess a number of distinct domains and bind multiple partners. A common problem in modeling signaling systems arises from a combinator...
Holger Conzelmann, Julio Saez-Rodriguez, Thomas Sa...
BMCBI
2010
140views more  BMCBI 2010»
14 years 11 months ago
An improved machine learning protocol for the identification of correct Sequest search results
Background: Mass spectrometry has become a standard method by which the proteomic profile of cell or tissue samples is characterized. To fully take advantage of tandem mass spectr...
Morten Kallberg, Hui Lu
EUC
2005
Springer
15 years 7 months ago
A Unified Context Model: Bringing Probabilistic Models to Context Ontology
Abstract. Ontology is a promising tool to model and reason about context information in pervasive computing environment. However, ontology does not support representation and reaso...
Binh An Truong, Young-Koo Lee, Sungyoung Lee
BMCBI
2006
159views more  BMCBI 2006»
15 years 1 months ago
EpiJen: a server for multistep T cell epitope prediction
Background: The main processing pathway for MHC class I ligands involves degradation of proteins by the proteasome, followed by transport of products by the transporter associated...
Irini A. Doytchinova, Pingping Guan, Darren R. Flo...
BMCBI
2006
76views more  BMCBI 2006»
15 years 1 months ago
Coloring the Mu transpososome
Background: Tangle analysis has been applied successfully to study proteins which bind two segments of DNA and can knot and link circular DNA. We show how tangle analysis can be e...
Isabel K. Darcy, Jeff Chang, Nathan Druivenga, Col...