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ISBRA
2007
Springer
15 years 7 months ago
Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice
Abstract. The lattice approach to biological structural analysis was made popular by the HP model for protein folding, but had not been used previously for RNA secondary structure ...
Minghui Jiang, Martin Mayne, Joel Gillespie
CEC
2003
IEEE
15 years 7 months ago
Transcription and evolution of a virtual bacteria culture
Abstract- This paper describes implementation details and results from a simulated multi-agent bacteria ecosystem. Each bacterium is encoded on a DNA-like genome, specifying the ge...
Ricardo M. Hoar, Joanne K. Penner, Christian Jacob
FLAIRS
2001
15 years 3 months ago
Views: Fundamental Building Blocks in the Process of Knowledge Discovery
We present a novel approach to describe the knowledge discovery process, focusing on a generalized form of attribute called view. It is observed that the process of knowledge disc...
Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Ke...
HYBRID
2001
Springer
15 years 6 months ago
Hybrid Modeling and Simulation of Biomolecular Networks
Abstract. In a biological cell, cellular functions and the genetic regulatory apparatus are implemented and controlled by a network of chemical reactions in which regulatory protei...
Rajeev Alur, Calin Belta, Franjo Ivancic
111
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ICML
2007
IEEE
16 years 2 months ago
An integrated approach to feature invention and model construction for drug activity prediction
We present a new machine learning approach for 3D-QSAR, the task of predicting binding affinities of molecules to target proteins based on 3D structure. Our approach predicts bind...
David Page, Jesse Davis, Soumya Ray, Vítor ...