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RECOMB
2008
Springer
16 years 1 months ago
Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information
High-accuracy protein structure modeling demands accurate and very fast side chain prediction since such a procedure must be repeatedly called at each step of structure refinement....
Jing Zhang, Xin Gao, Jinbo Xu, Ming Li
CORR
2010
Springer
144views Education» more  CORR 2010»
15 years 1 months ago
CLP-based protein fragment assembly
Abstract. The paper investigates a novel approach, based on Constraint Logic Programming (CLP), to predict the 3D conformation of a protein via fragments assembly. The fragments ar...
Alessandro Dal Palù, Agostino Dovier, Feder...
ATAL
2010
Springer
15 years 2 months ago
Reasoning about strategies of multi-agent programs
Verification of multi-agent programs is a key problem in agent research and development. This paper focuses on multi-agent programs that consist of a finite set of BDI-based agent...
Mehdi Dastani, Wojciech Jamroga
BMCBI
2007
113views more  BMCBI 2007»
15 years 1 months ago
Learning biophysically-motivated parameters for alpha helix prediction
Background: Our goal is to develop a state-of-the-art protein secondary structure predictor, with an intuitive and biophysically-motivated energy model. We treat structure predict...
Blaise Gassend, Charles W. O'Donnell, William Thie...
CIBCB
2006
IEEE
15 years 7 months ago
A Novel Graphical Model Approach to Segmenting Cell Images
— Successful biological image analysis usually requires satisfactory segmentations to identify regions of interest as an intermediate step. Here we present a novel graphical mode...
Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, R...